Reconciliation of Sequence data and updated annotation of the genome of Agrobacterium tumefaciens C58, and distribution of a linear chromosome in the genus Agrobacterium

Steven Slater; João C. Setubal; Brad Goodner; Kathryn Houmiel; Jian Sun; Rajinder Kaul; Barry S. Goldman; Stephen K. Farrand; Nalvo Almeida; Thomas Burr; Eugene Nester; David M. Rhoads; Ryosuke Kadoi; Trucian Ostheimer; Nicole Pride; Allison Sabo; Erin Henry; Erin Telepak; Lindsey Cromes; Alana Harkleroad; Louis Oliphant; Phil Pratt-Szegila; Roy Welch; Derek Wood

doi:10.1128/AEM.03192-12

Reconciliation of Sequence data and updated annotation of the genome of Agrobacterium tumefaciens C58, and distribution of a linear chromosome in the genus Agrobacterium

Steven Slater, João C. Setubal, Brad Goodner, Kathryn Houmiel, Jian Sun, Rajinder Kaul, Barry S. Goldman, Stephen K. Farrand, Nalvo Almeida, Thomas Burr, Eugene Nester, David M. Rhoads, Ryosuke Kadoi, Trucian Ostheimer, Nicole Pride, Allison Sabo, Erin Henry, Erin Telepak, Lindsey Cromes, Alana HarkleroadLouis Oliphant, Phil Pratt-Szegila, Roy Welch, Derek Wood

Research output: Contribution to journal › Article › peer-review

27 Scopus citations

Abstract

Two groups independently sequenced the Agrobacterium tumefaciens C58 genome in 2001. We report here consolidation of these sequences, updated annotation, and additional analysis of the evolutionary history of the linear chromosome, which is apparently limited to the biovar I group of Agrobacterium.

Original language	English (US)
Pages (from-to)	1414-1417
Number of pages	4
Journal	Applied and Environmental Microbiology
Volume	79
Issue number	4
DOIs	https://doi.org/10.1128/AEM.03192-12
State	Published - Feb 2013

ASJC Scopus subject areas

Biotechnology
Food Science
Applied Microbiology and Biotechnology
Ecology

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Slater, S., Setubal, J. C., Goodner, B., Houmiel, K., Sun, J., Kaul, R., Goldman, B. S., Farrand, S. K., Almeida, N., Burr, T., Nester, E., Rhoads, D. M., Kadoi, R., Ostheimer, T., Pride, N., Sabo, A., Henry, E., Telepak, E., Cromes, L., ... Wood, D. (2013). Reconciliation of Sequence data and updated annotation of the genome of Agrobacterium tumefaciens C58, and distribution of a linear chromosome in the genus Agrobacterium. Applied and Environmental Microbiology, 79(4), 1414-1417. https://doi.org/10.1128/AEM.03192-12

Reconciliation of Sequence data and updated annotation of the genome of Agrobacterium tumefaciens C58, and distribution of a linear chromosome in the genus Agrobacterium. / Slater, Steven; Setubal, João C.; Goodner, Brad et al.
In: Applied and Environmental Microbiology, Vol. 79, No. 4, 02.2013, p. 1414-1417.

Research output: Contribution to journal › Article › peer-review

Slater, S, Setubal, JC, Goodner, B, Houmiel, K, Sun, J, Kaul, R, Goldman, BS, Farrand, SK, Almeida, N, Burr, T, Nester, E, Rhoads, DM, Kadoi, R, Ostheimer, T, Pride, N, Sabo, A, Henry, E, Telepak, E, Cromes, L, Harkleroad, A, Oliphant, L, Pratt-Szegila, P, Welch, R & Wood, D 2013, 'Reconciliation of Sequence data and updated annotation of the genome of Agrobacterium tumefaciens C58, and distribution of a linear chromosome in the genus Agrobacterium', Applied and Environmental Microbiology, vol. 79, no. 4, pp. 1414-1417. https://doi.org/10.1128/AEM.03192-12

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Reconciliation of Sequence data and updated annotation of the genome of Agrobacterium tumefaciens C58, and distribution of a linear chromosome in the genus Agrobacterium

Abstract

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