Reconciliation of Sequence data and updated annotation of the genome of Agrobacterium tumefaciens C58, and distribution of a linear chromosome in the genus Agrobacterium

Steven Slater, João C. Setubal, Brad Goodner, Kathryn Houmiel, Jian Sun, Rajinder Kaul, Barry S. Goldman, Stephen K. Farrand, Nalvo Almeida, Thomas Burr, Eugene Nester, David M. Rhoads, Ryosuke Kadoi, Trucian Ostheimer, Nicole Pride, Allison Sabo, Erin Henry, Erin Telepak, Lindsey Cromes, Alana HarkleroadLouis Oliphant, Phil Pratt-Szegila, Roy Welch, Derek Wood

Research output: Contribution to journalArticle

19 Scopus citations

Abstract

Two groups independently sequenced the Agrobacterium tumefaciens C58 genome in 2001. We report here consolidation of these sequences, updated annotation, and additional analysis of the evolutionary history of the linear chromosome, which is apparently limited to the biovar I group of Agrobacterium.

Original languageEnglish (US)
Pages (from-to)1414-1417
Number of pages4
JournalApplied and Environmental Microbiology
Volume79
Issue number4
DOIs
StatePublished - Feb 2013

ASJC Scopus subject areas

  • Biotechnology
  • Food Science
  • Applied Microbiology and Biotechnology
  • Ecology

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    Slater, S., Setubal, J. C., Goodner, B., Houmiel, K., Sun, J., Kaul, R., Goldman, B. S., Farrand, S. K., Almeida, N., Burr, T., Nester, E., Rhoads, D. M., Kadoi, R., Ostheimer, T., Pride, N., Sabo, A., Henry, E., Telepak, E., Cromes, L., ... Wood, D. (2013). Reconciliation of Sequence data and updated annotation of the genome of Agrobacterium tumefaciens C58, and distribution of a linear chromosome in the genus Agrobacterium. Applied and Environmental Microbiology, 79(4), 1414-1417. https://doi.org/10.1128/AEM.03192-12