TY - JOUR
T1 - Machine-learning classification of 22q11.2 deletion syndrome
T2 - A diffusion tensor imaging study
AU - Tylee, Daniel S.
AU - Kikinis, Zora
AU - Quinn, Thomas P.
AU - Antshel, Kevin M.
AU - Fremont, Wanda
AU - Tahir, Muhammad A.
AU - Zhu, Anni
AU - Gong, Xue
AU - Glatt, Stephen J.
AU - Coman, Ioana L.
AU - Shenton, Martha E.
AU - Kates, Wendy R.
AU - Makris, Nikos
N1 - Publisher Copyright:
© 2017 The Authors
PY - 2017
Y1 - 2017
N2 - Chromosome 22q11.2 deletion syndrome (22q11.2DS) is a genetic neurodevelopmental syndrome that has been studied intensively in order to understand relationships between the genetic microdeletion, brain development, cognitive function, and the emergence of psychiatric symptoms. White matter microstructural abnormalities identified using diffusion tensor imaging methods have been reported to affect a variety of neuroanatomical tracts in 22q11.2DS. In the present study, we sought to combine two discovery-based approaches: (1) white matter query language was used to parcellate the brain's white matter into tracts connecting pairs of 34, bilateral cortical regions and (2) the diffusion imaging characteristics of the resulting tracts were analyzed using a machine-learning method called support vector machine in order to optimize the selection of a set of imaging features that maximally discriminated 22q11.2DS and comparison subjects. With this unique approach, we both confirmed previously-recognized 22q11.2DS-related abnormalities in the inferior longitudinal fasciculus (ILF), and identified, for the first time, 22q11.2DS-related anomalies in the middle longitudinal fascicle and the extreme capsule, which may have been overlooked in previous, hypothesis-guided studies. We further observed that, in participants with 22q11.2DS, ILF metrics were significantly associated with positive prodromal symptoms of psychosis.
AB - Chromosome 22q11.2 deletion syndrome (22q11.2DS) is a genetic neurodevelopmental syndrome that has been studied intensively in order to understand relationships between the genetic microdeletion, brain development, cognitive function, and the emergence of psychiatric symptoms. White matter microstructural abnormalities identified using diffusion tensor imaging methods have been reported to affect a variety of neuroanatomical tracts in 22q11.2DS. In the present study, we sought to combine two discovery-based approaches: (1) white matter query language was used to parcellate the brain's white matter into tracts connecting pairs of 34, bilateral cortical regions and (2) the diffusion imaging characteristics of the resulting tracts were analyzed using a machine-learning method called support vector machine in order to optimize the selection of a set of imaging features that maximally discriminated 22q11.2DS and comparison subjects. With this unique approach, we both confirmed previously-recognized 22q11.2DS-related abnormalities in the inferior longitudinal fasciculus (ILF), and identified, for the first time, 22q11.2DS-related anomalies in the middle longitudinal fascicle and the extreme capsule, which may have been overlooked in previous, hypothesis-guided studies. We further observed that, in participants with 22q11.2DS, ILF metrics were significantly associated with positive prodromal symptoms of psychosis.
KW - 22q11.2 deletion syndrome
KW - Callosal asymmetry
KW - Diffusion tensor imaging
KW - Extreme capsule
KW - Inferior longitudinal fasciculus
KW - Machine-learning
KW - Middle longitudinal fascicle
KW - Support vector machine
KW - Velocardiofacial syndrome
KW - White matter query language
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U2 - 10.1016/j.nicl.2017.04.029
DO - 10.1016/j.nicl.2017.04.029
M3 - Article
C2 - 28761808
AN - SCOPUS:85023605356
SN - 2213-1582
VL - 15
SP - 832
EP - 842
JO - NeuroImage: Clinical
JF - NeuroImage: Clinical
ER -