TY - JOUR
T1 - Does the lipid environment impact the open-state conductance of an engineered β-barrel protein nanopore?
AU - Tomita, Noriko
AU - Mohammad, Mohammad M.
AU - Niedzwiecki, David J.
AU - Ohta, Makoto
AU - Movileanu, Liviu
N1 - Funding Information:
The authors thank Jiaming Liu and Belete R. Cheneke for technical assistance and stimulating discussions. This work was partly supported by Young Researcher Overseas Visits Program for Vitalizing Brain Circulation (IFS, JSPS) and by a Global COE Program Grant of the World Center of Education and Research for Trans-disciplinary Flow Dynamics from Tohoku University. We also acknowledge support by grants from the US National Science Foundation ( DMR-1006332 , L.M.) and the National Institutes of Health ( R01 GM088403 , L.M.). N. Tomita is a recipient of a postdoctoral fellowship from Japan Society for the Promotion of Science.
PY - 2013/3
Y1 - 2013/3
N2 - Using rational membrane protein design, we were recently able to obtain a β-barrel protein nanopore that was robust under an unusually broad range of experimental circumstances. This protein nanopore was based upon the native scaffold of the bacterial ferric hydroxamate uptake component A (FhuA) of Escherichia coli. In this work, we expanded the examinations of the open-state current of this engineered protein nanopore, also called FhuA ΔC/Δ4L, employing an array of lipid bilayer systems that contained charged and uncharged as well as conical and cylindrical lipids. Remarkably, systematical single-channel analysis of FhuA ΔC/Δ4L indicated that most of its biophysical features, such as the unitary conductance and the stability of the open-state current, were not altered under the conditions tested in this work. However, electrical recordings at high transmembrane potentials revealed that the presence of conical phospholipids within the bilayer catalyzes the first, stepwise current transition of the FhuA ΔC/Δ4L protein nanopore to a lower-conductance open state. This study reinforces the stability of the open-state current of the engineered FhuA ΔC/Δ4L protein nanopore under various experimental conditions, paving the way for further critical developments in biosensing and molecular biomedical diagnosis.
AB - Using rational membrane protein design, we were recently able to obtain a β-barrel protein nanopore that was robust under an unusually broad range of experimental circumstances. This protein nanopore was based upon the native scaffold of the bacterial ferric hydroxamate uptake component A (FhuA) of Escherichia coli. In this work, we expanded the examinations of the open-state current of this engineered protein nanopore, also called FhuA ΔC/Δ4L, employing an array of lipid bilayer systems that contained charged and uncharged as well as conical and cylindrical lipids. Remarkably, systematical single-channel analysis of FhuA ΔC/Δ4L indicated that most of its biophysical features, such as the unitary conductance and the stability of the open-state current, were not altered under the conditions tested in this work. However, electrical recordings at high transmembrane potentials revealed that the presence of conical phospholipids within the bilayer catalyzes the first, stepwise current transition of the FhuA ΔC/Δ4L protein nanopore to a lower-conductance open state. This study reinforces the stability of the open-state current of the engineered FhuA ΔC/Δ4L protein nanopore under various experimental conditions, paving the way for further critical developments in biosensing and molecular biomedical diagnosis.
KW - Channel closure
KW - Dimensionless shape factor
KW - E. coli FhuA
KW - Lipid effect
KW - Planar lipid bilayer
KW - Single-channel recording
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U2 - 10.1016/j.bbamem.2012.12.003
DO - 10.1016/j.bbamem.2012.12.003
M3 - Article
C2 - 23246446
AN - SCOPUS:84872110512
SN - 0005-2736
VL - 1828
SP - 1057
EP - 1065
JO - Biochimica et Biophysica Acta - Biomembranes
JF - Biochimica et Biophysica Acta - Biomembranes
IS - 3
ER -