Detecting Health Advice in Medical Research Literature

Yingya Li, Jun Wang, Bei Yu

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Abstract

Health and medical researchers often give clinical and policy recommendations to inform health practice and public health policy. However, no current health information system supports the direct retrieval of health advice. This study fills the gap by developing and validating an NLP-based prediction model for identifying health advice in research publications. We annotated a corpus of 6,000 sentences extracted from structured abstracts in PubMed publications as “strong advice”, “weak advice”, or “no advice”, and developed a BERT-based model that can predict, with a macro-averaged F1-score of 0.93, whether a sentence gives strong advice, weak advice, or not. The prediction model generalized well to sentences in both unstructured abstracts and discussion sections, where health advice normally appears. We also conducted a case study that applied this prediction model to retrieve specific health advice on COVID-19 treatments from LitCovid, a large COVID research literature portal, demonstrating the usefulness of retrieving health advice sentences as an advanced research literature navigation function for health researchers and the general public.

Original languageEnglish (US)
Title of host publicationEMNLP 2021 - 2021 Conference on Empirical Methods in Natural Language Processing, Proceedings
PublisherAssociation for Computational Linguistics (ACL)
Pages6018-6029
Number of pages12
ISBN (Electronic)9781955917094
StatePublished - 2021
Externally publishedYes
Event2021 Conference on Empirical Methods in Natural Language Processing, EMNLP 2021 - Virtual, Punta Cana, Dominican Republic
Duration: Nov 7 2021Nov 11 2021

Publication series

NameEMNLP 2021 - 2021 Conference on Empirical Methods in Natural Language Processing, Proceedings

Conference

Conference2021 Conference on Empirical Methods in Natural Language Processing, EMNLP 2021
Country/TerritoryDominican Republic
CityVirtual, Punta Cana
Period11/7/2111/11/21

ASJC Scopus subject areas

  • Computational Theory and Mathematics
  • Computer Science Applications
  • Information Systems

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