TY - JOUR
T1 - Cation selectivity is a conserved feature in the OccD subfamily of Pseudomonas aeruginosa
AU - Liu, Jiaming
AU - Wolfe, Aaron J.
AU - Eren, Elif
AU - Vijayaraghavan, Jagamya
AU - Indic, Mridhu
AU - Van Den Berg, Bert
AU - Movileanu, Liviu
N1 - Funding Information:
We are grateful to all colleagues in the Movileanu and van den Berg research groups, who provided technical assistance at various stages of this work. This paper was funded in part by grants from the US National Science Foundation ( DMR-1006332 , L.M.) and the National Institutes of Health ( R01 GM088403 , L.M. and R01 GM085785 , B.v.d.B).
PY - 2012/11
Y1 - 2012/11
N2 - To achieve the uptake of small, water-soluble nutrients, Pseudomonas aeruginosa, a pathogenic Gram-negative bacterium, employs substrate-specific channels located within its outer membrane. In this paper, we present a detailed description of the single-channel characteristics of six members of the outer membrane carboxylate channel D (OccD) subfamily. Recent structural studies showed that the OccD proteins share common features, such as a closely related, monomeric, 18-stranded β-barrel conformation and large extracellular loops, which are folded back into the channel lumen. Here, we report that the OccD proteins displayed single-channel activity with a unitary conductance covering an unusually broad range, between 20 and 670 pS, as well as a diverse gating dynamics. Interestingly, we found that cation selectivity is a conserved trait among all members of the OccD subfamily, bringing a new distinction between the members of the OccD subfamily and the anion-selective OccK channels. Conserved cation selectivity of the OccD channels is in accord with an increased specificity and selectivity of these proteins for positively charged, carboxylate-containing substrates.
AB - To achieve the uptake of small, water-soluble nutrients, Pseudomonas aeruginosa, a pathogenic Gram-negative bacterium, employs substrate-specific channels located within its outer membrane. In this paper, we present a detailed description of the single-channel characteristics of six members of the outer membrane carboxylate channel D (OccD) subfamily. Recent structural studies showed that the OccD proteins share common features, such as a closely related, monomeric, 18-stranded β-barrel conformation and large extracellular loops, which are folded back into the channel lumen. Here, we report that the OccD proteins displayed single-channel activity with a unitary conductance covering an unusually broad range, between 20 and 670 pS, as well as a diverse gating dynamics. Interestingly, we found that cation selectivity is a conserved trait among all members of the OccD subfamily, bringing a new distinction between the members of the OccD subfamily and the anion-selective OccK channels. Conserved cation selectivity of the OccD channels is in accord with an increased specificity and selectivity of these proteins for positively charged, carboxylate-containing substrates.
KW - Single-channel electrical recording
KW - Single-molecule biophysics
KW - Spontaneous gating
KW - The OccD subfamily
KW - The OprD family
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U2 - 10.1016/j.bbamem.2012.07.009
DO - 10.1016/j.bbamem.2012.07.009
M3 - Article
C2 - 22824298
AN - SCOPUS:84864805540
SN - 0005-2736
VL - 1818
SP - 2908
EP - 2916
JO - Biochimica et Biophysica Acta - Biomembranes
JF - Biochimica et Biophysica Acta - Biomembranes
IS - 11
ER -