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1986 …2022
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Research Output 1986 2019

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Article
2007
60 Citations (Scopus)

Generation and analysis of ESTs from the eastern oyster, Crassostrea virginica Gmelin and identification of microsatellite and SNP markers

Quilang, J., Wang, S., Li, P., Abernathy, J., Peatman, E., Wang, Y., Wang, L., Shi, Y., Wallace, R., Guo, X. & Liu, Z. J., Jun 8 2007, In : BMC Genomics. 8, 157.

Research output: Contribution to journalArticle

Crassostrea
Expressed Sequence Tags
Microsatellite Repeats
Single Nucleotide Polymorphism
Gene Library
31 Citations (Scopus)

Generation and analysis of expressed sequence tags from the ciliate protozoan parasite Ichthyophthirius multifiliis

Abernathy, J. W., Xu, P., Li, P., Xu, D. H., Kucuktas, H., Klesius, P., Arias, C. & Liu, Z. J., Jun 18 2007, In : BMC Genomics. 8, 176.

Research output: Contribution to journalArticle

Expressed Sequence Tags
Parasites
Nucleic Acid Databases
Plasmodium falciparum
Gene Expression
4 Citations (Scopus)

Patterns of concerted evolution of the rDNA family in a natural population of Zhikong scallop, Chlamys farreri

Wang, S., Zhang, L., Zhan, A., Wang, X., Liu, Z. J., Hu, J. & Bao, Z., Dec 2007, In : Journal of Molecular Evolution. 65, 6, p. 660-667 8 p.

Research output: Contribution to journalArticle

Pectinidae
concerted evolution
scallops
Ribosomal DNA
Genetic Recombination
26 Citations (Scopus)

Repeat structure of the catfish genome: A genomic and transcriptomic assessment of Tc1-like transposon elements in channel catfish (Ictalurus punctatus)

Nandi, S., Peatman, E., Xu, P., Wang, S., Li, P. & Liu, Z. J., Sep 2007, In : Genetica. 131, 1, p. 81-90 10 p.

Research output: Contribution to journalArticle

Ictaluridae
Catfishes
Ictalurus punctatus
transcriptomics
catfish
82 Citations (Scopus)

Structural characterisation and expression analysis of Toll-like receptor 2 gene from catfish

Baoprasertkul, P., Peatman, E., Abernathy, J. & Liu, Z. J., Apr 2007, In : Fish and Shellfish Immunology. 22, 4, p. 418-426 9 p.

Research output: Contribution to journalArticle

Ictaluridae
Toll-Like Receptor 2
Catfishes
Ictalurus punctatus
catfish
64 Citations (Scopus)

Towards the ictalurid catfish transcriptome: Generation and analysis of 31,215 catfish ESTs

Li, P., Peatman, E., Wang, S., Feng, J., He, C., Baoprasertkul, P., Xu, P., Kucuktas, H., Nandi, S., Somridhivej, B., Serapion, J., Simmons, M., Turan, C., Liu, L., Muir, W., Dunham, R., Brady, Y., Grizzle, J. & Liu, Z. J., Jun 18 2007, In : BMC Genomics. 8, p. 177 1 p.

Research output: Contribution to journalArticle

Catfishes
Expressed Sequence Tags
Gene Expression Profiling
Ictaluridae
Gene Library
2006
56 Citations (Scopus)

Catfish CC chemokines: Genomic clustering, duplications, and expression after bacterial infection with Edwardsiella ictaluri

Peatman, E., Bao, B., Peng, X., Baoprasertkul, P., Brady, Y. & Liu, Z. J., Mar 2006, In : Molecular Genetics and Genomics. 275, 3, p. 297-309 13 p.

Research output: Contribution to journalArticle

Edwardsiella ictaluri
CC Chemokines
Catfishes
Bacterial Infections
Cluster Analysis
38 Citations (Scopus)

CC chemokines in zebrafish: Evidence for extensive intrachromosomal gene duplications

Peatman, E. & Liu, Z. J., Sep 2006, In : Genomics. 88, 3, p. 381-385 5 p.

Research output: Contribution to journalArticle

CC Chemokines
Gene Duplication
Zebrafish
Chemokines
Ictaluridae
67 Citations (Scopus)

Channel catfish BAC-end sequences for marker development and assessment of syntenic conservation with other fish species

Xu, P., Wang, S., Liu, L., Peatman, E., Somridhivej, B., Thimmapuram, J., Gong, G. & Liu, Z. J., Aug 2006, In : Animal Genetics. 37, 4, p. 321-326 6 p.

Research output: Contribution to journalArticle

Ictaluridae
Synteny
Ictalurus punctatus
Catfishes
Fishes
69 Citations (Scopus)

Characterization of 23 CC chemokine genes and analysis of their expression in channel catfish (Ictalurus punctatus)

Bao, B., Peatman, E., Peng, X., Baoprasertkul, P., Wang, G. & Liu, Z. J., 2006, In : Developmental and Comparative Immunology. 30, 9, p. 783-796 14 p.

Research output: Contribution to journalArticle

Ictaluridae
CC Chemokines
Catfishes
Genes
Chemokines
55 Citations (Scopus)

Characterization of a NK-lysin antimicrobial peptide gene from channel catfish

Wang, Q., Bao, B., Wang, Y., Peatman, E. & Liu, Z. J., Mar 2006, In : Fish and Shellfish Immunology. 20, 3, p. 419-426 8 p.

Research output: Contribution to journalArticle

Molecular Sequence Data
Ictaluridae
Antimicrobial Cationic Peptides
Gene Components
Proteolipids
19 Citations (Scopus)

Combined use of 16S ribosomal DNA and automated ribosomal intergenic spacer analysis to study the bacterial community in catfish ponds

Arias, C. R., Abernathy, J. W. & Liu, Z. J., Sep 2006, In : Letters in Applied Microbiology. 43, 3, p. 287-292 6 p.

Research output: Contribution to journalArticle

Catfishes
Ponds
Ribosomal DNA
DNA
pond
37 Citations (Scopus)

Comparison of domestic and wild channel catfish (Ictalurus punctatus) populations provides no evidence for genetic impact

Simmons, M., Mickett, K., Kucuktas, H., Li, P., Dunham, R. & Liu, Z. J., Mar 10 2006, In : Aquaculture. 252, 2-4, p. 133-146 14 p.

Research output: Contribution to journalArticle

Ictalurus punctatus
wild population
heterozygosity
catfish
watershed
48 Citations (Scopus)

Genomic organization, gene duplication, and expression analysis of interleukin-1β in channel catfish (Ictalurus punctatus)

Wang, Y., Wang, Q., Baoprasertkul, P., Peatman, E. & Liu, Z. J., Apr 2006, In : Molecular Immunology. 43, 10, p. 1653-1664 12 p.

Research output: Contribution to journalArticle

Ictaluridae
Gene Duplication
Interleukin-1
Gene Expression
Catfishes
53 Citations (Scopus)

Major histocompatibility complex class IIB allele polymorphism and its association with resistance/susceptibility to Vibrio anguillarum in Japanese flounder (Paralichthys olivaceus)

Zhang, Y. X., Chen, S. L., Liu, Y. G., Sha, Z. X. & Liu, Z. J., Dec 2006, In : Marine Biotechnology. 8, 6, p. 600-610 11 p.

Research output: Contribution to journalArticle

Flounder
major histocompatibility complex
Vibrio anguillarum
Vibrio
Paralichthys olivaceus
16 Citations (Scopus)

Molecular systematics of bisexual Artemia populations

Hou, L., Bi, X., Zou, X., He, C., Yang, L., Qu, R. & Liu, Z. J., May 2006, In : Aquaculture Research. 37, 7, p. 671-680 10 p.

Research output: Contribution to journalArticle

molecular systematics
Artemia
phylogenetics
DNA
cytochrome
55 Citations (Scopus)

NK-lysin of channel catfish: Gene triplication, sequence variation, and expression analysis

Wang, Q., Wang, Y., Xu, P. & Liu, Z. J., Apr 2006, In : Molecular Immunology. 43, 10, p. 1676-1686 11 p.

Research output: Contribution to journalArticle

Ictaluridae
Genes
Catfishes
Zebrafish
NK-lysin
89 Citations (Scopus)

The catfish liver-expressed antimicrobial peptide 2 (LEAP-2) gene is expressed in a wide range of tissues and developmentally regulated

Bao, B., Peatman, E., Xu, P., Li, P., Zeng, H., He, C. & Liu, Z. J., Feb 2006, In : Molecular Immunology. 43, 4, p. 367-377 11 p.

Research output: Contribution to journalArticle

Hepcidins
Catfishes
Ictaluridae
Genes
Peptides
78 Citations (Scopus)

Toll-like receptor 3 and TICAM genes in catfish: Species-specific expression profiles following infection with Edwardsiella ictaluri

Baoprasertkul, P., Peatman, E., Somridhivej, B. & Liu, Z. J., Oct 2006, In : Immunogenetics. 58, 10, p. 817-830 14 p.

Research output: Contribution to journalArticle

Edwardsiella ictaluri
Toll-Like Receptor 3
Catfishes
Ictaluridae
Infection
4 Citations (Scopus)
expressed sequence tags
transcriptome
genome
cDNA libraries
gene
7 Citations (Scopus)

Transgenic fish - Where we are and where do we go?

Dunham, R. A. & Liu, Z. J., Dec 2006, In : Israeli Journal of Aquaculture - Bamidgeh. 58, 4, p. 297-319 23 p.

Research output: Contribution to journalArticle

commercialization
environmental risk
genomics
genetically modified organisms
disease resistance
2005
84 Citations (Scopus)

Analysis of a catfish gene resembling interleukin-8: cDNA cloning, gene structure, and expression after infection with Edwardsiella ictaluri

Chen, L., He, C., Baoprasertkul, P., Xu, P., Li, P., Serapion, J., Waldbieser, G., Wolters, W. & Liu, Z. J., 2005, In : Developmental and Comparative Immunology. 29, 2, p. 135-142 8 p.

Research output: Contribution to journalArticle

Edwardsiella ictaluri
Catfishes
Interleukin-8
Organism Cloning
Complementary DNA
37 Citations (Scopus)

Analysis of genetic variation in selected stocks of hatchery flounder, Paralichthys olivaceus, using AFLP markers

Liu, Y. G., Chen, S. L., Li, B. F., Wang, Z. J. & Liu, Z. J., Oct 2005, In : Biochemical Systematics and Ecology. 33, 10, p. 993-1005 13 p.

Research output: Contribution to journalArticle

Flounder
Paralichthys olivaceus
flounder
Polymorphism
hatchery
127 Citations (Scopus)

Catfish hepcidin gene is expressed in a wide range of tissues and exhibits tissue-specific upregulation after bacterial infection

Bao, B., Peatman, E., Li, P., He, C. & Liu, Z. J., 2005, In : Developmental and Comparative Immunology. 29, 11, p. 939-950 12 p.

Research output: Contribution to journalArticle

Hepcidins
Catfishes
Bacterial Infections
Up-Regulation
Ictaluridae
63 Citations (Scopus)
Ictaluridae
Peptides
Catfishes
Genes
Bacterial Artificial Chromosomes
63 Citations (Scopus)

Constitutive expression of three novel catfish CXC chemokines: Homeostatic chemokines in teleost fish

Baoprasertkul, P., He, C., Peatman, E., Zhang, S., Li, P. & Liu, Z. J., Jul 2005, In : Molecular Immunology. 42, 11, p. 1355-1366 12 p.

Research output: Contribution to journalArticle

CXC Chemokines
Catfishes
Chemokines
Fishes
Ictaluridae
39 Citations (Scopus)

In silico identification and expression analysis of 12 novel CC chemokines in catfish

Peatman, E., Bao, B., Baoprasertkul, P. & Liu, Z. J., Jul 2005, In : Immunogenetics. 57, 6, p. 409-419 11 p.

Research output: Contribution to journalArticle

CC Chemokines
Catfishes
Chemokines
Computer Simulation
Fishes
21 Citations (Scopus)

Isolation of SFRS3 gene and its differential expression during metamorphosis involving eye migration of Japanese flounder Paralichthys olivaceus

Bao, B., Yang, G., Liu, Z. J., Li, S., Wang, Z. & Ren, D., Aug 30 2005, In : Biochimica et Biophysica Acta - General Subjects. 1725, 1, p. 64-70 7 p.

Research output: Contribution to journalArticle

Flounder
Genes
Flatfishes
Tissue
Amino Acids
2004
121 Citations (Scopus)

Bioinformatic mining of type I microsatellites from expressed sequence tags of channel catfish (Ictalurus punctatus)

Serapion, J., Kucuktas, H., Feng, J. & Liu, Z. J., Aug 2004, In : Marine Biotechnology. 6, 4, p. 364-377 14 p.

Research output: Contribution to journalArticle

Ictaluridae
bioinformatics
Expressed Sequence Tags
Ictalurus punctatus
Bioinformatics
14 Citations (Scopus)

Development of type I markers in channel catfish through intron sequencing

Serapion, J., Waldbieser, G. C., Wolters, W. & Liu, Z. J., Dec 2004, In : Animal Genetics. 35, 6, p. 463-466 4 p.

Research output: Contribution to journalArticle

Molecular Sequence Data
Ictaluridae
Genetic Linkage
DNA Primers
DNA primers
3 Citations (Scopus)

Economics of production of channel catfish, Ictalurus punctatus, female x blue catfish, I. furcatus, male hybrid eggs and fry

Ligeon, C., Crews, J., Argue, B., Phelps, R., Liu, Z. J., Yant, R., Benfrey, J., Dunham, R. A. & Gagalac, F., Jan 1 2004, In : Aquaculture Economics and Management. 8, 5-6, p. 269-280 12 p.

Research output: Contribution to journalArticle

Ictalurus furcatus
fish roe
Ictalurus punctatus
production economics
fish fry
12 Citations (Scopus)

Economics of production of channel catfish, ictalurus punctatus, female x blue catfish, I. furcatus, male hybrid fingerlings and foodfish

Ligeon, C., Dunham, R. A., Jolly, C., Crews, J., Argue, B., Liu, Z. J., Yant, R., Benfrey, J. & Gagalac, F., Jan 1 2004, In : Aquaculture Economics and Management. 8, 5-6, p. 253-267 15 p.

Research output: Contribution to journalArticle

Ictalurus furcatus
Ictalurus punctatus
production economics
fingerlings
economics
8 Citations (Scopus)

Identification of mariner elements from house flies (Musca domestica) and German cockroaches (Blattella germanica)

Liu, N., Pridgeon, J. W., Wang, H., Liu, Z. J. & Zhang, L., Aug 2004, In : Insect Molecular Biology. 13, 4, p. 443-447 5 p.

Research output: Contribution to journalArticle

Blattellidae
Houseflies
Blattella germanica
Musca domestica
Diptera
21 Citations (Scopus)

Molecular cloning of proopiomelanocortin cDNA and multi-tissue mRNA expression in channel catfish

Karsi, A., Waldbieser, G. C., Small, B. C., Liu, Z. J. & Wolters, W. R., Jul 2004, In : General and Comparative Endocrinology. 137, 3, p. 312-321 10 p.

Research output: Contribution to journalArticle

pro-opiomelanocortin
Ictaluridae
Pro-Opiomelanocortin
Ictalurus punctatus
Molecular Cloning
50 Citations (Scopus)

Multiple CC chemokines in channel catfish and blue catfish as revealed by analysis of expressed sequence tags

He, C., Peatman, E., Baoprasertkul, P., Kucuktas, H. & Liu, Z. J., Aug 2004, In : Immunogenetics. 56, 5, p. 379-387 9 p.

Research output: Contribution to journalArticle

Ictaluridae
CC Chemokines
Catfishes
Expressed Sequence Tags
Chemokines
23 Citations (Scopus)

Purification of vitellin from the ovary of Chinese mitten-handed crab (Eriocheir sinensis) and development of an antivitellin ELISA

Chen, L., Jiang, H., Zhou, Z., Li, K., Li, K., Deng, G. Y. & Liu, Z. J., Jul 2004, In : Comparative Biochemistry and Physiology - B Biochemistry and Molecular Biology. 138, 3, p. 305-311 7 p.

Research output: Contribution to journalArticle

Vitellins
Immunosorbents
Purification
Ovary
Assays
65 Citations (Scopus)

Sequence analysis and expression of a CXC chemokine in resistant and susceptible catfish after infection of Edwardsiella ictaluri

Baoprasertkul, P., Peatman, E., Chen, L., He, C., Kucuktas, H., Li, P., Simmons, M. & Liu, Z. J., Jun 2004, In : Developmental and Comparative Immunology. 28, 7-8, p. 769-780 12 p.

Research output: Contribution to journalArticle

Edwardsiella ictaluri
CXC Chemokines
Catfishes
Sequence Analysis
Ictaluridae
2003
144 Citations (Scopus)

An AFLP-Based Genetic Linkage Map of Channel Catfish (Ictalurus punctatus) Constructed by Using an Interspecific Hybrid Resource Family

Liu, Z. J., Karsi, A., Li, P., Cao, D. & Dunham, R., Oct 2003, In : Genetics. 165, 2, p. 687-694 8 p.

Research output: Contribution to journalArticle

Ictaluridae
Catfishes
Genetic Linkage
Aquaculture
Cluster Analysis
69 Citations (Scopus)

Assessing genetic diversity of domestic populations of channel catfish (Ictalurus punctatus) in Alabama using AFLP markers

Mickett, K., Morton, C., Feng, J., Li, P., Simmons, M., Cao, D., Dunham, R. A. & Liu, Z. J., Dec 1 2003, In : Aquaculture. 228, 1-4, p. 91-105 15 p.

Research output: Contribution to journalArticle

Ictalurus punctatus
amplified fragment length polymorphism
polymorphism
farm
genetic variation
54 Citations (Scopus)

Dress-out and fillet yields of channel catfish, Ictalurus punctatus, blue catfish, Ictalurus furcatus, and their F1, F2 and backcross hybrids

Argue, B. J., Liu, Z. J. & Dunham, R. A., Dec 1 2003, In : Aquaculture. 228, 1-4, p. 81-90 10 p.

Research output: Contribution to journalArticle

Ictalurus furcatus
Ictalurus punctatus
fillets
catfish
heterosis
71 Citations (Scopus)

Putative SNP discovery in interspecific hybrids of catfish by comparative EST analysis

He, C., Chen, L., Simmons, M., Li, P., Kim, S. & Liu, Z. J., Dec 2003, In : Animal Genetics. 34, 6, p. 445-448 4 p.

Research output: Contribution to journalArticle

Catfishes
Expressed Sequence Tags
Ictalurus furcatus
Ictalurus punctatus
expressed sequence tags
24 Citations (Scopus)

Translational machinery of channel catfish: II. Complementary DNA and expression of the complete set of 47 60S ribosomal proteins

Patterson, A., Karsi, A., Feng, J. & Liu, Z. J., Feb 27 2003, In : Gene. 305, 2, p. 151-160 10 p.

Research output: Contribution to journalArticle

Ictaluridae
Ribosomal Proteins
Complementary DNA
Genes
Fishes
2002
118 Citations (Scopus)

Differential gene expression in the brain of channel catfish (Ictalurus punctatus) in response to cold acclimation

Ju, Z., Dunham, R. & Liu, Z. J., 2002, In : Molecular Genetics and Genomics. 268, 1, p. 87-95 9 p.

Research output: Contribution to journalArticle

Ictaluridae
Acclimatization
Gene Expression
Brain
Genes
79 Citations (Scopus)

Expression profile of the channel catfish spleen: Analysis of genes involved in immune functions

Kocabas, A. M., Li, P., Cao, D., Karsi, A., He, C., Patterson, A., Ju, Z., Dunham, R. A. & Liu, Z. J., 2002, In : Marine Biotechnology. 4, 6, p. 526-536 11 p.

Research output: Contribution to journalArticle

Ictaluridae
Ictalurus punctatus
spleen
Spleen
Clone Cells
82 Citations (Scopus)

Molecular characterization and differential expression of the myostatin gene in channel catfish (Ictalurus punctatus)

Kocabas, A. M., Kucuktas, H., Dunham, R. A. & Liu, Z. J., May 3 2002, In : Biochimica et Biophysica Acta - Gene Structure and Expression. 1575, 1-3, p. 99-107 9 p.

Research output: Contribution to journalArticle

Myostatin
Ictaluridae
Genes
Gene Expression
Complementary DNA
103 Citations (Scopus)

Transcriptome analysis of channel catfish (Ictalurus punctatus): Initial analysis of gene expression and microsatellite-containing cDNAs in the skin

Karsi, A., Cao, D., Li, P., Patterson, A., Kocabas, A., Feng, J., Ju, Z., Mickett, K. D. & Liu, Z. J., Feb 20 2002, In : Gene. 285, 1-2, p. 157-168 12 p.

Research output: Contribution to journalArticle

Ictaluridae
Gene Expression Profiling
Microsatellite Repeats
Expressed Sequence Tags
Complementary DNA
34 Citations (Scopus)

Translational machinery of channel catfish: I. A transcriptomic approach to the analysis of 32 40S ribosomal protein genes and their expression

Karsi, A., Patterson, A., Feng, J. & Liu, Z. J., May 29 2002, In : Gene. 291, 1-2, p. 177-186 10 p.

Research output: Contribution to journalArticle

Ictaluridae
Ribosomal Proteins
Gene Expression
Genes
Complementary DNA
2001
29 Citations (Scopus)

Channel catfish follicle-stimulating hormone and luteinizing hormone: Complementary DNA cloning and expression during ovulation

Liu, Z. J., Kim, S. & Karsi, A., 2001, In : Marine Biotechnology. 3, 6, p. 590-599 10 p.

Research output: Contribution to journalArticle

Ictaluridae
Catfishes
complementary DNA
follicle-stimulating hormone
Ictalurus punctatus
52 Citations (Scopus)

Detection of Yersinia ruckeri in rainbow trout blood by use of the polymerase chain reaction

Altinok, I., Grizzle, J. M. & Liu, Z. J., Jan 26 2001, In : Diseases of Aquatic Organisms. 44, 1, p. 29-34 6 p.

Research output: Contribution to journalArticle

Yersinia ruckeri
polymerase chain reaction
rainbow
Oncorhynchus mykiss
blood
51 Citations (Scopus)

Effects of insert size on transposition efficiency of the Sleeping Beauty transposon in mouse cells

Karsi, A., Moav, B., Hackett, P. & Liu, Z. J., 2001, In : Marine Biotechnology. 3, 3, p. 241-245 5 p.

Research output: Contribution to journalArticle

Beauty
transposition (genetics)
transposons
Efficiency
mice