• 9308 Citations
  • 56 h-Index
1986 …2022

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Genome-wide association analysis of intra-specific QTL associated with the resistance for enteric septicemia of catfish

Shi, H., Zhou, T., Wang, X., Yang, Y., Wu, C., Liu, S., Bao, L., Li, N., Yuan, Z., Jin, Y., Tan, S., Wang, W., Zhong, X., Qin, G., Geng, X., Gao, D., Dunham, R. & Liu, Z. J., Jul 2 2018, (Accepted/In press) In : Molecular Genetics and Genomics. p. 1-14 14 p.

Research output: Contribution to journalArticle

6 Scopus citations

Genome-Wide Association Study Reveals Multiple Novel QTL Associated with Low Oxygen Tolerance in Hybrid Catfish

Zhong, X., Wang, X., Zhou, T., Jin, Y., Tan, S., Jiang, C., Geng, X., Li, N., Shi, H., Zeng, Q., Yang, Y., Yuan, Z., Bao, L., Liu, S., Tian, C., Peatman, E., Li, Q. & Liu, Z. J., Aug 1 2017, In : Marine Biotechnology. 19, 4, p. 379-390 12 p.

Research output: Contribution to journalArticle

29 Scopus citations

Genome-Wide Identification, Characterization and Phylogenetic Analysis of 50 Catfish ATP-Binding Cassette (ABC) Transporter Genes

Liu, S., Li, Q. & Liu, Z. J., May 16 2013, In : PLoS One. 8, 5, e63895.

Research output: Contribution to journalArticle

36 Scopus citations

Genome-wide identification of Hsp40 genes in channel catfish and their regulated expression after bacterial infection

Song, L., Zhang, J., Li, C., Yao, J., Jiang, C., Li, Y., Liu, S. & Liu, Z. J., Dec 26 2014, In : PLoS One. 9, 12, e115752.

Research output: Contribution to journalArticle

16 Scopus citations

Genome-wide identification of Hsp70 genes in channel catfish and their regulated expression after bacterial infection

Song, L., Li, C., Xie, Y., Liu, S., Zhang, J., Yao, J., Jiang, C., Li, Y. & Liu, Z. J., Feb 1 2016, In : Fish and Shellfish Immunology. 49, p. 154-162 9 p.

Research output: Contribution to journalArticle

16 Scopus citations

Genomic basis of adaptive evolution: The survival of amur ide (leuciscus waleckii) in an extremely alkaline environment

Xu, J., Li, J. T., Jiang, Y., Peng, W., Yao, Z., Chen, B., Jiang, L., Feng, J., Ji, P., Liu, G., Liu, Z. J., Tai, R., Dong, C., Sun, X., Zhao, Z. X., Zhang, Y., Wang, J., Li, S., Zhao, Y., Yang, J. & 2 others, Sun, X. & Xu, P., 2017, In : Molecular Biology and Evolution. 34, 1, p. 145-159 15 p.

Research output: Contribution to journalArticle

16 Scopus citations

Genomic organization, gene duplication, and expression analysis of interleukin-1β in channel catfish (Ictalurus punctatus)

Wang, Y., Wang, Q., Baoprasertkul, P., Peatman, E. & Liu, Z. J., Apr 2006, In : Molecular Immunology. 43, 10, p. 1653-1664 12 p.

Research output: Contribution to journalArticle

50 Scopus citations

Genomic organization and evolution of olfactory receptors and trace amine-associated receptors in channel catfish, Ictalurus punctatus

Gao, S., Liu, S., Yao, J., Li, N., Yuan, Z., Zhou, T., Li, Q. & Liu, Z. J., Mar 1 2017, In : Biochimica et Biophysica Acta - General Subjects. 1861, 3, p. 644-651 8 p.

Research output: Contribution to journalArticle

5 Scopus citations

Gonadotropin α-subunit glycoprotein from channel catfish (Ictalurus punctatus) and its expression during hormoneinduced ovulation

Liu, Z. J., Li, P., Argue, B. J. & Dunham, R. A., Sep 1997, In : Molecular Marine Biology and Biotechnology. 6, 3, p. 217-227 11 p.

Research output: Contribution to journalArticle

28 Scopus citations

Growth of channel catfish (Ictalurus punctatus), blue catfish (I. furcatus), and their F1, F2, F3, and F1reciprocal backcross hybrids in earthen ponds

Argue, B. J., Kuhlers, D. L., Liu, Z. J. & Dunham, R. A., Oct 1 2014, In : Journal of Animal Science. 92, 10, p. 4297-4305 9 p.

Research output: Contribution to journalArticle

4 Scopus citations

GWAS Analysis Indicated Importance of NF-κB Signaling Pathway in Host Resistance Against Motile Aeromonas Septicemia Disease in Catfish

Wang, W., Tan, S., Luo, J., Shi, H., Zhou, T., Yang, Y., Jin, Y., Wang, X., Niu, D., Yuan, Z., Gao, D., Dunham, R. & Liu, Z. J., Jan 1 2019, In : Marine Biotechnology.

Research output: Contribution to journalArticle

6 Scopus citations

GWAS analysis of QTL for enteric septicemia of catfish and their involved genes suggest evolutionary conservation of a molecular mechanism of disease resistance

Zhou, T., Liu, S., Geng, X., Jin, Y., Jiang, C., Bao, L., Yao, J., Zhang, Y., Zhang, J., Sun, L., Wang, X., Li, N., Tan, S. & Liu, Z. J., Feb 1 2017, In : Molecular Genetics and Genomics. 292, 1, p. 231-242 12 p.

Research output: Contribution to journalArticle

26 Scopus citations

GWAS analysis using interspecific backcross progenies reveals superior blue catfish alleles responsible for strong resistance against enteric septicemia of catfish

Tan, S., Zhou, T., Wang, W., Jin, Y., Wang, X., Geng, X., Luo, J., Yuan, Z., Yang, Y., Shi, H., Gao, D., Dunham, R. & Liu, Z. J., May 8 2018, (Accepted/In press) In : Molecular Genetics and Genomics. p. 1-14 14 p.

Research output: Contribution to journalArticle

5 Scopus citations

Heat stress induced alternative splicing in catfish as determined by transcriptome analysis

Tan, S., Wang, W., Tian, C., Niu, D., Zhou, T., Jin, Y., Yang, Y., Gao, D., Dunham, R. & Liu, Z. J., Mar 1 2019, In : Comparative Biochemistry and Physiology - Part D: Genomics and Proteomics. 29, p. 166-172 7 p.

Research output: Contribution to journalArticle

4 Scopus citations

Hetero-stagger cloning: Efficient and rapid cloning of PCR products

Liu, Z. J., Jun 15 1996, In : Nucleic Acids Research. 24, 12, p. 2458-2459 2 p.

Research output: Contribution to journalArticle

16 Scopus citations

High-density interspecific genetic linkage mapping provides insights into genomic incompatibility between channel catfish and blue catfish

Liu, S., Li, Y., Qin, Z., Geng, X., Bao, L., Kaltenboeck, L., Kucuktas, H., Dunham, R. & Liu, Z. J., Feb 1 2016, In : Animal Genetics. 47, 1, p. 81-90 10 p.

Research output: Contribution to journalArticle

19 Scopus citations

High levels of conservation at microsatellite loci among ictalurid catfishes

Liu, Z. J., Tan, G., Kucuktas, H., Li, P., Karsi, A., Yant, D. R. & Dunham, R. A., 1999, In : Journal of Heredity. 90, 2, p. 307-312 6 p.

Research output: Contribution to journalArticle

31 Scopus citations

Historical demography of common carp estimated from individuals collected from various parts of the world using the pairwise sequentially markovian coalescent approach

Yuan, Z., Huang, W., Liu, S., Xu, P., Dunham, R. & Liu, Z. J., Jan 3 2018, (Accepted/In press) In : Genetica. p. 1-7 7 p.

Research output: Contribution to journalArticle

Hsp90, Hsp60 and sHsp families of heat shock protein genes in channel catfish and their expression after bacterial infections

Xie, Y., Song, L., Weng, Z., Liu, S. & Liu, Z. J., Jun 1 2015, In : Fish and Shellfish Immunology. 44, 2, p. 642-651 10 p.

Research output: Contribution to journalArticle

42 Scopus citations

Identification, annotation and expression analysis of 29 Rho GTPase genes from channel catfish (Ictalurus punctatus) after bacterial infections

Tan, S., Yao, J., Zhou, T., Liu, S., Yuan, Z., Tian, C., Li, Q. & Liu, Z. J., Feb 1 2017, In : Developmental and Comparative Immunology. 67, p. 445-451 7 p.

Research output: Contribution to journalArticle

6 Scopus citations

Identification, phylogeny and expression analysis of suppressors of cytokine signaling in channel catfish

Yao, J., Mu, W., Liu, S., Zhang, J., Wen, H. & Liu, Z. J., Apr 1 2015, In : Molecular Immunology. 64, 2, p. 276-284 9 p.

Research output: Contribution to journalArticle

20 Scopus citations

Identification and analysis of genome-wide SNPs provide insight into signatures of selection and domestication in channel catfish (Ictalurus punctatus)

Sun, L., Liu, S., Wang, R., Jiang, Y., Zhang, Y., Zhang, J., Bao, L., Kaltenboeck, L., Dunham, R., Waldbieser, G. & Liu, Z. J., Oct 14 2014, In : PLoS One. 9, 10, e109666.

Research output: Contribution to journalArticle

25 Scopus citations

Identification and characterization of full-length cDNAs in channel catfish (Ictalurus punctatus) and blue catfish (Ictalurus furcatus)

Chen, F., Lee, Y., Jiang, Y., Wang, S., Peatman, E., Abernathy, J., Liu, H., Liu, S., Kucuktas, H., Ke, C. & Liu, Z. J., 2010, In : PLoS One. 5, 7, e11546.

Research output: Contribution to journalArticle

35 Scopus citations

Identification and characterization of matrix metalloproteinase-13 sequence structure and expression during embryogenesis and infection in channel catfish (Ictalurus punctatus)

Jiang, Y., Abernathy, J. W., Peatman, E., Liu, H., Wang, S., Xu, D. H., Kucuktas, H., Klesius, P. & Liu, Z. J., May 2010, In : Developmental and Comparative Immunology. 34, 5, p. 590-597 8 p.

Research output: Contribution to journalArticle

12 Scopus citations

Identification and characterization of MicroRNAs from longitudinal muscle and respiratory tree in sea cucumber (Apostichopus japonicus) using high-throughput sequencing

Wang, H., Liu, S., Cui, J., Li, C., Hu, Y., Zhou, W., Chang, Y., Qiu, X., Liu, Z. J. & Wang, X., Aug 5 2015, In : PLoS One. 10, 8, e0134899.

Research output: Contribution to journalArticle

11 Scopus citations
3 Scopus citations

Identification of mariner elements from house flies (Musca domestica) and German cockroaches (Blattella germanica)

Liu, N., Pridgeon, J. W., Wang, H., Liu, Z. J. & Zhang, L., Aug 2004, In : Insect Molecular Biology. 13, 4, p. 443-447 5 p.

Research output: Contribution to journalArticle

8 Scopus citations

Identification of NF-κB related genes in channel catfish and their expression profiles in mucosal tissues after columnaris bacterial infection

Wang, X., Liu, S., Yang, Y., Fu, Q., Abebe, A. & Liu, Z. J., May 1 2017, In : Developmental and Comparative Immunology. 70, p. 27-38 12 p.

Research output: Contribution to journalArticle

7 Scopus citations

Identification of novel genes significantly affecting growth in catfish through GWAS analysis

Li, N., Zhou, T., Geng, X., Jin, Y., Wang, X., Liu, S., Xu, X., Gao, D., Li, Q. & Liu, Z. J., Dec 12 2017, (Accepted/In press) In : Molecular Genetics and Genomics. p. 1-13 13 p.

Research output: Contribution to journalArticle

17 Scopus citations

Identification of reproduction-related genes and SSR-markers through expressed sequence tags analysis of a monsoon breeding carp rohu, labeo rohita (hamilton)

Sahu, D. K., Panda, S. P., Panda, S., Das, P., Meher, P. K., Hazra, R. K., Peatman, E., Liu, Z. J., Eknath, A. E. & Nandi, S., Jul 15 2013, In : Gene. 524, 1, p. 1-14 14 p.

Research output: Contribution to journalArticle

7 Scopus citations

Importance of the CArG box in regulation of β-actin-encoding genes

Liu, Z. J., Moav, B., Faras, A. J., Guise, K. S., Kapuscinski, A. R. & Hackett, P., Dec 15 1991, In : Gene. 108, 2, p. 211-217 7 p.

Research output: Contribution to journalArticle

22 Scopus citations
4 Scopus citations

Increased Alternative Splicing as a Host Response to Edwardsiella ictaluri Infection in Catfish

Tan, S., Wang, W., Zhong, X., Tian, C., Niu, D., Bao, L., Zhou, T., Jin, Y., Yang, Y., Yuan, Z., Gao, D., Dunham, R. & Liu, Z. J., Jul 16 2018, (Accepted/In press) In : Marine Biotechnology. p. 1-10 10 p.

Research output: Contribution to journalArticle

6 Scopus citations

Inheritance and linkage of allozymes and restriction fragment length polymorphisms in trembling aspen

Furnier, G. R., Liu, Z. J. & Furnier, G. R., 1993, In : Journal of Heredity. 84, 5, p. 419-424 6 p.

Research output: Contribution to journalArticle

26 Scopus citations
97 Scopus citations

Inheritance of RAPD markers in channel catfish (Ictalurus punctatus), blue catfish (I. furcatus), and their F1, F2 and backcross hybrids

Liu, Z. J., Li, P., Argue, B. J. & Dunham, R. A., Feb 1998, In : Animal Genetics. 29, 1, p. 58-62 5 p.

Research output: Contribution to journalArticle

58 Scopus citations

In silico identification and expression analysis of 12 novel CC chemokines in catfish

Peatman, E., Bao, B., Baoprasertkul, P. & Liu, Z. J., Jul 2005, In : Immunogenetics. 57, 6, p. 409-419 11 p.

Research output: Contribution to journalArticle

39 Scopus citations

Isolation and characterization of βact in gene of Carp (cyprinus carpio)

Liu, Z. J., Zhu, Z., Roberg, K., Faras, A., Guise, K., Kapuscinski, A. R. & Hacketptt, P. B., 1990, In : Mitochondrial DNA. 1, 2, p. 125-136 12 p.

Research output: Contribution to journalArticle

73 Scopus citations

Isolation of SFRS3 gene and its differential expression during metamorphosis involving eye migration of Japanese flounder Paralichthys olivaceus

Bao, B., Yang, G., Liu, Z. J., Li, S., Wang, Z. & Ren, D., Aug 30 2005, In : Biochimica et Biophysica Acta - General Subjects. 1725, 1, p. 64-70 7 p.

Research output: Contribution to journalArticle

21 Scopus citations

JAK and STAT members in channel catfish: Identification, phylogenetic analysis and expression profiling after Edwardsiella ictaluri infection

Jin, Y., Zhou, T., Li, N., Liu, S., Xu, X., Pan, Y., Tan, S., Shi, H., Yang, Y., Yuan, Z., Wang, W., Luo, J., Gao, D., Dunham, R. & Liu, Z. J., Apr 1 2018, In : Developmental and Comparative Immunology. 81, p. 334-341 8 p.

Research output: Contribution to journalArticle

6 Scopus citations

Large-scale SNP discovery and construction of a high-density genetic map of Colossoma macropomum through genotyping-by-sequencing

Da Silva Nunes, J. D. R., Liu, S., Pértille, F., Perazza, C. A., Villela, P. M. S., De Almeida-Val, V. M. F., Hilsdorf, A. W. S., Liu, Z. J. & Coutinho, L. L., Apr 7 2017, In : Scientific Reports. 7, 46112.

Research output: Contribution to journalArticle

7 Scopus citations

Major histocompatibility complex class IIB allele polymorphism and its association with resistance/susceptibility to Vibrio anguillarum in Japanese flounder (Paralichthys olivaceus)

Zhang, Y. X., Chen, S. L., Liu, Y. G., Sha, Z. X. & Liu, Z. J., Dec 2006, In : Marine Biotechnology. 8, 6, p. 600-610 11 p.

Research output: Contribution to journalArticle

53 Scopus citations

Male-Biased Genes in Catfish as Revealed by RNA-Seq Analysis of the Testis Transcriptome

Sun, F., Liu, S., Gao, X., Jiang, Y., Perera, D., Wang, X., Li, C., Sun, L., Zhang, J., Kaltenboeck, L., Dunham, R. & Liu, Z. J., Jul 12 2013, In : PLoS One. 8, 7, e68452.

Research output: Contribution to journalArticle

44 Scopus citations

Microarray analysis of gene expression in eastern oyster (Crassostrea virginica) reveals a novel combination of antimicrobial and oxidative stress host responses after dermo (Perkinsus marinus) challenge

Wang, S., Peatman, E., Liu, H., Bushek, D., Ford, S. E., Kucuktas, H., Quilang, J., Li, P., Wallace, R., Wang, Y., Guo, X. & Liu, Z. J., Dec 2010, In : Fish and Shellfish Immunology. 29, 6, p. 921-929 9 p.

Research output: Contribution to journalArticle

52 Scopus citations

Microarray analysis of gene expression in the blue catfish liver reveals early activation of the MHC class I pathway after infection with Edwardsiella ictaluri

Peatman, E., Terhune, J., Baoprasertkul, P., Xu, P., Nandi, S., Wang, S., Somridhivej, B., Kucuktas, H., Li, P., Dunham, R. & Liu, Z. J., Jan 2008, In : Molecular Immunology. 45, 2, p. 553-566 14 p.

Research output: Contribution to journalArticle

110 Scopus citations

Microfibrillar-associated protein 4 (MFAP4) genes in catfish play a novel role in innate immune responses

Niu, D., Peatman, E., Liu, H., Lu, J., Kucuktas, H., Liu, S., Sun, F., Zhang, H., Feng, T., Zhou, Z., Terhune, J., Waldbieser, G., Li, J. & Liu, Z. J., May 2011, In : Developmental and Comparative Immunology. 35, 5, p. 568-579 12 p.

Research output: Contribution to journalArticle

27 Scopus citations
29 Scopus citations

Molecular analysis and growth evaluation of northern pike (Esox Iucius) microinjected with growth hormone genes

Gross, M. L., Schneider, J. F., Moav, N., Moav, B., Alvarez, C., Myster, S. H., Liu, Z. J., Hallerman, E. M., Hackett, P. B., Guise, K. S., Faras, A. J. & Kapuscinski, A. R., May 15 1992, In : Aquaculture. 103, 3-4, p. 253-273 21 p.

Research output: Contribution to journalArticle

34 Scopus citations

Molecular and cellular evidence for biased mitotic gene conversion in hybrid scallop

Wang, S., Zhang, L., Hu, J., Bao, Z. & Liu, Z. J., 2010, In : BMC Evolutionary Biology. 10, 1, 6.

Research output: Contribution to journalArticle

9 Scopus citations

Molecular characteristics of an immobilization antigen gene of the fish-parasitic protozoan Ichthyophthirius multifiliis strain ARS-6

Xu, D. H., Panangala, V. S., Van Santen, V. L., Dybvig, K., Abernathy, J. W., Klesius, P. H., Liu, Z. J. & Russo, R., Nov 2009, In : Aquaculture Research. 40, 16, p. 1884-1892 9 p.

Research output: Contribution to journalArticle

6 Scopus citations