• 3094 Citations
  • 31 h-Index
1980 …2017
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Research Output 1980 2017

2017

Anhydrous Monoalkylguanidines in Aprotic and Nonpolar Solvents: Models for Deprotonated Arginine Side Chains in Membrane Environments

Banyikwa, A. T., Miller, S. E., Krebs, R. A., Xiao, Y., Carney, J. M. & Braiman, M. S., 2017, In : ACS Omega. 2, 10, p. 7239-7252 14 p.

Research output: Contribution to journalArticle

Arginine
Guanidine
Membranes
Microbial Rhodopsins
G-Protein-Coupled Receptors
3 Citations (Scopus)

Experimental and Computational Modeling of H-Bonded Arginine-Tyrosine Groupings in Aprotic Environments

Banyikwa, A. T., Goos, A., Kiemle, D. J., Foulkes, M. A. C. & Braiman, M. S., Jan 1 2017, In : ACS Omega. 2, 9, p. 5641-5659 19 p.

Research output: Contribution to journalArticle

Open Access
Arginine
Phenol
Phenols
Tyrosine
Guanidine
2015

Computations on the primary photoreaction of Br2 with CO2: Stepwise vs concerted addition of Br atoms

Xu, K., Korter, T. M. & Braiman, M. S., Apr 9 2015, In : Journal of Physical Chemistry A. 119, 14, p. 3348-3354 7 p.

Research output: Contribution to journalArticle

Atoms
Geometry
Photochemical reactions
geometry
Binding energy
2012
1 Citation (Scopus)

Bromine-sensitized solar photolysis of CO2

Braiman, M. S., Sailer-Kronlachner, W. & Varjas, C. J., Sep 6 2012, In : Journal of Physical Chemistry B. 116, 35, p. 10430-10436 7 p.

Research output: Contribution to journalArticle

Bromine
Photolysis
bromine
adsorbents
Adsorbents
2011
7 Citations (Scopus)

Infrared and visible absolute and difference spectra of bacteriorhodopsin photocycle intermediates

Hendler, R. W., Meuse, C. W., Braiman, M. S., Smith, P. D. & Kakareka, J. W., Sep 2011, In : Applied Spectroscopy. 65, 9, p. 1029-1045 17 p.

Research output: Contribution to journalArticle

Bacteriorhodopsins
Infrared radiation
cryogenic temperature
visible spectrum
confidence
2008
43 Citations (Scopus)

Optimized in vitro and in vivo expression of proteorhodopsin: A seven-transmembrane proton pump

Gourdon, P., Alfredsson, A., Pedersen, A., Malmerberg, E., Nyblom, M., Widell, M., Berntsson, R., Pinhassi, J., Braiman, M. S., Hansson, Ö., Bonander, N., Karlsson, G. & Neutze, R., Mar 2008, In : Protein Expression and Purification. 58, 1, p. 103-113 11 p.

Research output: Contribution to journalArticle

Proton Pumps
Cell-Free System
Surface waters
Escherichia coli
Purification
2005
8 Citations (Scopus)

Modeling amino acid side chains in proteins: 15N NMR spectra of guanidino groups in nonpolar environments

Xiao, Y. & Braiman, M. S., Sep 8 2005, In : Journal of Physical Chemistry B. 109, 35, p. 16953-16958 6 p.

Research output: Contribution to journalArticle

Protonation
amino acids
Amino acids
Arginine
Nuclear magnetic resonance

Rapid & Inexpensive Method for the Purification of Proteorhodopsin

Braiman, M. & Partha, R., Jul 7 2005, Patent No. 7,517,968

Research output: Patent

Membrane Proteins
proteorhodopsin
21 Citations (Scopus)

Time-resolved FTIR spectroscopy of the photointermediates involved in fast transient H + release by proteorhodopsin

Xiao, Y., Partha, R., Krebs, R. & Braiman, M. S., Jan 13 2005, In : Journal of Physical Chemistry B. 109, 1, p. 634-641 8 p.

Research output: Contribution to journalArticle

Photolysis
Phospholipids
Spectroscopy
flash
photolysis
19 Citations (Scopus)
Bacteriorhodopsins
Chromophores
Arginine
Archaeal Proteins
Mutation
2004
2 Citations (Scopus)

Characterization of Supported Cylinder-Planar Germanium Waveguide Sensors with Synchrotron Infrared Radiation

Vongsvivut, J., Fernandez, J., Ekgasit, S. & Braiman, M. S., Feb 2004, In : Applied Spectroscopy. 58, 2, p. 143-151 9 p.

Research output: Contribution to journalArticle

Germanium
infrared radiation
Synchrotron radiation
germanium
synchrotrons
36 Citations (Scopus)

Role of arginine-82 in fast proton release during the bacteriorhodopsin photocycle: A time-resolved FT-IR study of purple membranes containing 15N-labeled arginine

Xiao, Y., Hutson, M. S., Belenky, M., Herzfeld, J. & Braiman, M. S., Oct 12 2004, In : Biochemistry. 43, 40, p. 12809-12818 10 p.

Research output: Contribution to journalArticle

Purple Membrane
Bacteriorhodopsins
Arginine
Protons
Membranes
2003
29 Citations (Scopus)

Resonance Raman characterization of proteorhodopsin's chromophore environment

Krebs, R. A., Dunmire, D., Partha, R. & Braiman, M. S., Aug 7 2003, In : Journal of Physical Chemistry B. 107, 31, p. 7877-7883 7 p.

Research output: Contribution to journalArticle

Chromophores
chromophores
Bacteriorhodopsins
Proton Pumps
Schiff Bases
2002
38 Citations (Scopus)

Detection of fast light-activated H+ release and M intermediateformation from proteorhodopsin

Krebs, R. A., Alexiev, U., Partha, R., DeVita, A. M. & Braiman, M. S., Apr 9 2002, In : BMC Physiology. 2, p. 1-8 8 p., 1.

Research output: Contribution to journalArticle

Light
Bacteriorhodopsins
proteorhodopsin
Proton Pumps
Proteobacteria

Detection of fast light-activated H+ release and M intermediate formation from proteorhodopsin.

Krebs, R. A., Alexiev, U., Partha, R., DeVita, A. M. & Braiman, M. S., Apr 9 2002, In : BMC Physiology. 2, 1, p. 5 1 p.

Research output: Contribution to journalArticle

Light
Gammaproteobacteria
Bacteriorhodopsins
proteorhodopsin
Proton Pumps
5 Citations (Scopus)

Symmetrically tapered <30-μm-thick quasi-planar germanium waveguides as chemical sensors for microanalysis

Vongsvivut, J., Shilov, S. V., Ekgasit, S. & Braiman, M. S., Dec 2002, In : Applied Spectroscopy. 56, 12, p. 1552-1561 10 p.

Research output: Contribution to journalArticle

Germanium
Microanalysis
Chemical sensors
microanalysis
germanium
2001
12 Citations (Scopus)

Halide dependence of the halorhodopsin photocycle as measured by time-resolved infrared spectra

Hutson, M. S., Shilov, S. V., Krebs, R. & Braiman, M. S., 2001, In : Biophysical Journal. 80, 3, p. 1452-1465 14 p.

Research output: Contribution to journalArticle

Halorhodopsins
Fourier Analysis
Anion Transport Proteins
Temperature
2000
32 Citations (Scopus)

Evidence for a perturbation of arginine-82 in the bacteriorhodopsin photocycle from time-resolved infrared spectra

Hutson, M. S., Alexiev, U., Shilov, S. V., Wise, K. J. & Braiman, M. S., 2000, In : Biochemistry. 39, 43, p. 13189-13200 12 p.

Research output: Contribution to journalArticle

Bacteriorhodopsins
Arginine
Vibration
Infrared radiation
Microbial Rhodopsins
52 Citations (Scopus)

Long-Lived Delocalized Electron States in Quantum Dots: A Step-Scan Fourier Transform Infrared Study

Shim, M., Shilov, S. V., Braiman, M. S. & Guyot-Sionnest, P., Feb 24 2000, In : Journal of Physical Chemistry B. 104, 7, p. 1494-1496 3 p.

Research output: Contribution to journalArticle

electron states
Electron energy levels
Semiconductor quantum dots
Fourier transforms
quantum dots
3 Citations (Scopus)

Mid-IR evanescent-wave sensors for tiny biological samples

Shilov, S. V., Braiman, M. S. & Mi, L. Z., 2000, Proceedings of SPIE - The International Society for Optical Engineering. Society of Photo-Optical Instrumentation Engineers, Vol. 3918. p. 202-207 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

evanescent waves
Waveguides
waveguides
sensors
Sensors
1999
2 Citations (Scopus)

Application of doubled-angle phase correction method to time-resolved step-scan FT-IR spectra

Hutson, M. S. & Braiman, M. S., 1999, In : Vibrational Spectroscopy. 19, 2, p. 379-383 5 p.

Research output: Contribution to journalArticle

Fourier transforms
Halorhodopsins
Infrared radiation
Bacteriorhodopsins
Photolysis
50 Citations (Scopus)
Arginine
Protonation
Vibrational spectra
vibrational spectra
amino acids
1 Citation (Scopus)
Vibrational spectra
Bromides
vibrational spectra
amino acids
Arginine
2 Citations (Scopus)

Tapered quasi-planar germanium waveguides for mid-IR chemical and biochemical sensing

Braiman, M. S. & Mi, L. Z., 1999, Proceedings of SPIE - The International Society for Optical Engineering. Lieberman, R. A. (ed.). Society of Photo-Optical Instrumentation Engineers, Vol. 3540. p. 146-152 7 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Germanium
germanium
Waveguides
waveguides
tapering
1998
7 Citations (Scopus)

Arginine to glutamine substitutions in the fourth module of Xenopus interphotoreceptor retinoid-binding protein.

Baer, C. A., Van Niel, E. E., Cronk, J. W., Kinter, M. T., Sherman, N. E., Braiman, M. S. & Gonzalez-Fernandez, F., Dec 30 1998, In : Molecular Vision. 4, p. 30 1 p.

Research output: Contribution to journalArticle

Xenopus
Glutamine
Vitamin A
Arginine
Ligands
10 Citations (Scopus)

Direct phase correction of differential FT-IR spectra

Hutson, M. S. & Braiman, M. S., Jul 1998, In : Applied Spectroscopy. 52, 7, p. 974-982 9 p.

Research output: Contribution to journalArticle

Bacteriorhodopsins
Fourier transforms
infrared spectra
Infrared radiation
phase shift
14 Citations (Scopus)

Fourth module of Xenopus interphotoreceptor retinoid-binding protein: Activity in retinoid transfer between the retinal pigment epithelium and rod photoreceptors

Gonzalez-Fernandez, F., Baer, C. A., Baker, E., Okajima, T. I. L., Wiggert, B., Braiman, M. S. & Pepperberg, D. R., 1998, In : Current Eye Research. 17, 12, p. 1150-1157 8 p.

Research output: Contribution to journalArticle

Retinal Rod Photoreceptor Cells
Retinal Pigment Epithelium
Retinoids
Xenopus
Retinaldehyde
25 Citations (Scopus)
Thioredoxins
Vitamin A
Peptide Hydrolases
Escherichia coli
Exons
1997
17 Citations (Scopus)
Planar waveguides
evanescent waves
Absorption spectra
Waveguides
waveguides
2 Citations (Scopus)

Mid-IR evanescent-wave absorption spectra of thin films and coatings measured with a ∼50-μm-thick planar Ge waveguide sensors

Stone, J. J., Braiman, M. S. & Plunkett, S. E., 1997, Proceedings of SPIE - The International Society for Optical Engineering. Lieberman, R. A. (ed.). Vol. 3105. p. 371-377 7 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

evanescent waves
Absorption spectra
Waveguides
waveguides
absorption spectra
24 Citations (Scopus)

Nano- and Microsecond Time-Resolved FTIR Spectroscopy of the Halorhodopsin Photocycle

Dioumaev, A. K. & Braiman, M. S., Dec 1997, In : Photochemistry and Photobiology. 66, 6, p. 755-763 9 p.

Research output: Contribution to journalArticle

Halorhodopsins
Fourier Transform Infrared Spectroscopy
Chromophores
Spectrum Analysis
Spectroscopy
27 Citations (Scopus)

Supported planar germanium waveguides for infrared evanescent-wave sensing

Plunkett, S. E., Propst, S. & Braiman, M. S., Jun 20 1997, In : Applied Optics. 36, 18, p. 4055-4061 7 p.

Research output: Contribution to journalArticle

evanescent waves
Germanium
germanium
Waveguides
Infrared radiation
3 Citations (Scopus)

Truncational mutagenesis of the fourth module of xenopus irbp

Baer, C. A., Van Niel, E. E., Braiman, M. S. & Gonzalez-Fernandez, F., 1997, In : Investigative Ophthalmology and Visual Science. 38, 4

Research output: Contribution to journalArticle

Xenopus
Mutagenesis
Vitamin A
Thioredoxins
Binding Sites
47 Citations (Scopus)
Bacteriorhodopsins
Spectroscopy
Schiff Bases
room temperature
Chromophores
14 Citations (Scopus)

Vibrational spectra of individual millimeter-size membrane patches using miniature infrared waveguides

Plunkett, S. E., Jonas, R. E. & Braiman, M. S., Oct 1997, In : Biophysical Journal. 73, 4, p. 2235-2240 6 p.

Research output: Contribution to journalArticle

Membranes
Bacteriorhodopsins
Lipids
Optical Fibers
Proteins
1996
47 Citations (Scopus)

A large photolysis-induced pKa increase of the chromophore counterion in bacteriorhodopsin: Implications for ion transport mechanisms of retinal proteins

Braiman, M. S., Dioumaev, A. K. & Lewis, J. R., Feb 1996, In : Biophysical Journal. 70, 2 I, p. 939-947 9 p.

Research output: Contribution to journalArticle

Bacteriorhodopsins
Schiff Bases
Photolysis
Ion Transport
Protons
28 Citations (Scopus)

Slow nonequilibrium dynamical rearrangement of the lateral structure of a lipid membrane

Jørgensen, K., Klinger, A., Braiman, M. S. & Biltonen, R. L., 1996, In : Journal of Physical Chemistry. 100, 8, p. 2766-2769 4 p.

Research output: Contribution to journalArticle

Membrane Lipids
lipids
membranes
membrane structures
Membrane structures
1995
6 Citations (Scopus)
Halorhodopsins
Bacteriorhodopsins
Fourier Transform Infrared Spectroscopy
Spectrum Analysis
pumping
56 Citations (Scopus)
Vibrational spectra
Amino acids
Proteins
Amino Acids
Propionic acid
1994
39 Citations (Scopus)

Anion-protein interactions during halorhodopsin pumping: Halide binding at the protonated schiff base

Walter, T. J. & Braiman, M. S., 1994, In : Biochemistry. 33, 7, p. 1724-1733 10 p.

Research output: Contribution to journalArticle

Halorhodopsins
Schiff Bases
Anions
Proteins
Hydrogen
15 Citations (Scopus)

Expression and characterization of the fourth repeat of xenopus interphotoreceptor retinoid-binding protein in E. coli

Baer, C. A., Kittredge, K. L., Klinger, A. L., Briercheck, D. M., Braiman, M. S. & Gonzalez-Fernandez, F., 1994, In : Current Eye Research. 13, 6, p. 391-400 10 p.

Research output: Contribution to journalArticle

Xenopus
Vitamin A
Escherichia coli
Ligands
Inclusion Bodies
46 Citations (Scopus)

Infrared spectroscopic detection of light-induced change in chloride-arginine interaction in halorhodopsin

Braiman, M. S., Walter, T. J. & Briercheck, D. M., 1994, In : Biochemistry. 33, 7, p. 1629-1635 7 p.

Research output: Contribution to journalArticle

Halorhodopsins
Arginine
Chlorides
Infrared radiation
Light
66 Citations (Scopus)

Structure and orientation of the transmembrane domain of glycophorin a in lipid bilayers

Smith, S. O., Jonas, R., Braiman, M. S. & Bormann, B. J., 1994, In : Biochemistry. 33, 20, p. 6334-6341 8 p.

Research output: Contribution to journalArticle

Glycophorin
Lipid bilayers
Lipid Bilayers
Peptides
Nuclear magnetic resonance
1993
2 Citations (Scopus)
Evanescent Wave
Diamond
evanescent waves
Coupler
Strombus or kite or diamond
11 Citations (Scopus)
Diamond
evanescent waves
Absorption spectroscopy
Infrared spectroscopy
Diamonds
6 Citations (Scopus)

Evanescent-wave IR spectroscopy of single-bilayer membranes coated on chalcogenide fibers: sensitivity improvements using a diamond rod coupler between fiber and source

Braiman, M. S. & Jonas, R. E., 1993, Proceedings of SPIE - The International Society for Optical Engineering. Lieberman, R. A. (ed.). Publ by Society of Photo-Optical Instrumentation Engineers, Vol. 1796. p. 402-411 10 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

evanescent waves
couplers
Infrared spectroscopy
Diamonds
rods
88 Citations (Scopus)

Proton transfer from Asp-96 to the bacteriorhodopsin schiff base is caused by a decrease of the pKa of Asp-96 which follows a protein backbone conformational change

Cao, Y., Váró, G., Klinger, A. L., Czajkowsky, D. M., Braiman, M. S., Needleman, R. & Lanyi, J. K., 1993, In : Biochemistry. 32, 8, p. 1981-1990 10 p.

Research output: Contribution to journalArticle

Bacteriorhodopsins
Proton transfer
Schiff Bases
Protons
Deprotonation
1992
6 Citations (Scopus)
Halobacterium salinarum
Bacteriorhodopsins
Fourier Analysis
46 Citations (Scopus)
Opsins
Fourier Analysis
Rhodopsin
metarhodopsins
Glutamates
1991
58 Citations (Scopus)
Bacteriorhodopsins
Infrared radiation
Kinetics
kinetics
Deprotonation