Department of Chemistry

2013

Protein posttranslational modification

Hougland, J. L., Darling, J. & Flynn, S., Jan 1 2013, Molecular Basis of Oxidative Stress: Chemistry, Mechanisms, and Disease Pathogenesis. Wiley, p. 71-92 22 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Post Translational Protein Processing

Oxidative stress

Proteins

Oxidative Stress

Biological Phenomena

10 Citations (Scopus)

Regio- and stereoselective trans-silylvinylation of internal alkynes catalyzed by RuHCl(CO)(PCy3)2

Zhao, J., Liu, S., Marino, N. & Clark, D. A., Apr 2013, In : Chemical Science. 4, 4, p. 1547-1551 5 p.

Research output: Contribution to journal › Article

Alkynes

Carbon Monoxide

Acrylates

Carbonylation

10 Citations (Scopus)

Reprogramming EF-hands for design of catalytically amplified lanthanide sensors

Mack, K. L., Moroz, O. V., Moroz, Y. S., Olsen, A. B., McLaughlin, J. M. & Korendovych, I., Apr 2013, In : Journal of Biological Inorganic Chemistry. 18, 4, p. 411-418 8 p.

Research output: Contribution to journal › Article

EF Hand Motifs

Lanthanoid Series Elements

Metal ions

Metals

Calcium

3 Citations (Scopus)

Self-assembly: En route to patchy superlattices

Maye, M. M., Jan 2013, In : Nature Nanotechnology. 8, 1, p. 5-6 2 p.

Research output: Contribution to journal › Article

Superlattices

nanotechnology

Nanotechnology

Nanostructured materials

Self assembly

Ship Inhibitors and Uses Thereof

Chisholm, J. D. & Kerr, W. G., Apr 25 2013, Patent No. 9,447,139

Research output: Patent

Ships

Graft vs Host Disease

Multiple Myeloma

Transplants

Breast Neoplasms

11 Citations (Scopus)

Solid state coordination chemistry: Structural consequences of varying diphosphonate tether length and fluoride incorporation in he copper-bisterpy/oxomolybdenum/organodiphosphonate system (bisterpy = 2,2′:4′,4″:2″,2′″-quarterpyridyl-60, 600-di-2-pyridine)

Jones, S., Vargas, J. M., Pellizzeri, S., O'Connor, C. J. & Zubieta, J. A., Jan 30 2013, In : Inorganica Chimica Acta. 395, p. 44-57 14 p.

Research output: Contribution to journal › Article

Diphosphonates

Fluorides

Pyridine

fluorides

Copper

8 Citations (Scopus)

Solid state coordination chemistry of metal-azolate compounds: Structural consequences of incorporation of phosphate components in the Co(II)/4-pyridyltetrazolate/phosphate system

Darling, K. & Zubieta, J. A., Jan 1 2013, In : Inorganica Chimica Acta. 394, p. 512-518 7 p.

Research output: Contribution to journal › Article

metal compounds

phosphates

Phosphates

Metals

Ligands

7 Citations (Scopus)

Solid state coordination chemistry of molybdenum oxides: Construction of bimetallic organic-inorganic hybrid materials from Keggin clusters and copper-imine building blocks

Jones, S., Aldous, A., Burkholder, E. & Zubieta, J. A., Mar 22 2013, In : Polyhedron. 52, p. 582-590 9 p.

Research output: Contribution to journal › Article

Molybdenum oxide

molybdenum oxides

Imines

Hybrid materials

imines

12 Citations (Scopus)

Stereochemical control of nonamphiphilic lyotropic liquid crystals: Chiral nematic phase of assemblies separated by six nanometers of aqueous solvents

Yang, S., Wang, B., Cui, D., Kerwood, D., Wilkens, S., Han, J. & Luk, Y. Y., Jun 13 2013, In : Journal of Physical Chemistry B. 117, 23, p. 7133-7143 11 p.

Research output: Contribution to journal › Article

Liquid Crystals

Nematic liquid crystals

Liquid crystals

assemblies

liquid crystals

16 Citations (Scopus)

Structures and biofilm inhibition activities of brominated furanones for Escherichia coli and Pseudomonas aeruginosa

Shetye, G. S., Singh, N., Gao, X., Bandyopadhyay, D., Yan, A. & Luk, Y. Y., Jul 2013, In : MedChemComm. 4, 7, p. 1079-1084 6 p.

Research output: Contribution to journal › Article

Biofilms

Pseudomonas aeruginosa

Escherichia coli

Quorum Sensing

Molecules

18 Citations (Scopus)

Super-compressible DNA nanoparticle lattices

Srivastava, S., Nykypanchuk, D., Maye, M. M., Tkachenko, A. V. & Gang, O., Nov 28 2013, In : Soft Matter. 9, 44, p. 10452-10457 6 p.

Research output: Contribution to journal › Article

deoxyribonucleic acid

Nanoparticles

nanoparticles

DNA

DNA Probes

1 Citation (Scopus)

Surface control of blastospore attachment and ligand-mediated hyphae adhesion of Candida albicans

Varghese, N., Yang, S., Sejwal, P. & Luk, Y. Y., Nov 14 2013, In : Chemical Communications. 49, 88, p. 10418-10420 3 p.

Research output: Contribution to journal › Article

Control surfaces

Candida

Adhesion

Ligands

Ethylene Glycol

23 Citations (Scopus)

Synthesis, Characterization and Pharmacodynamics of Vitamin-B12-Conjugated Glucagon-Like Peptide-1

Clardy-James, S., Chepurny, O. G., Leech, C. A., Holz, G. G. & Doyle, R. P., Apr 2013, In : ChemMedChem. 8, 4, p. 582-586 5 p.

Research output: Contribution to journal › Article

Pharmacodynamics

Glucagon-Like Peptide 1

Vitamin B 12

Peptides

Weapons

5 Citations (Scopus)

Synthesis of 2-amino-imidazo[4,5-b]pyridines

Rosenberg, A. J., Williams, T. M., Jordan, A. J. & Clark, D. A., May 14 2013, In : Organic and Biomolecular Chemistry. 11, 18, p. 3064-3072 9 p.

Research output: Contribution to journal › Article

pyridines

Halogenation

halogenation

Amination

synthesis

13 Citations (Scopus)

Terahertz vibrations of crystalline acyclic and cyclic diglycine: Benchmarks for London force correction models

Juliano, T. R. & Korter, T. M., Oct 10 2013, In : Journal of Physical Chemistry A. 117, 40, p. 10504-10512 9 p.

Research output: Contribution to journal › Article

Glycylglycine

intermolecular forces

density functional theory

Crystalline materials

vibration

5 Citations (Scopus)

The ability of single-chain surfactants to emulsify an aqueous-based liquid crystal oscillates with odd-even parity of alkyl-chain length

Varghese, N., Shetye, G. S., Yang, S., Wilkens, S., Smith, R. P. & Luk, Y. Y., Dec 15 2013, In : Journal of Colloid and Interface Science. 412, p. 95-99 5 p.

Research output: Contribution to journal › Article

Liquid Crystals

Chain length

Surface-Active Agents

Liquid crystals

Surface active agents

31 Citations (Scopus)

Thermal aggregation properties of nanoparticles modified with temperature sensitive copolymers

Hamner, K. L. & Maye, M. M., Dec 10 2013, In : Langmuir. 29, 49, p. 15217-15223 7 p.

Research output: Contribution to journal › Article

copolymers

Polymers

Agglomeration

Copolymers

thermodynamic properties

9 Citations (Scopus)

Three-dimensional bimetallic oxides constructed from molybdophosphonate chains and secondary-metal/4-pyridyltetrazole components

Jones, S., Darling, K. & Zubieta, J. A., Jan 30 2013, In : Inorganica Chimica Acta. 395, p. 89-94 6 p.

Research output: Contribution to journal › Article

Oxides

Metals

tetrazoles

molybdenum oxides

Molybdenum

11 Citations (Scopus)

Using solid-state density functional theory and terahertz spectroscopy to spectroscopically distinguish the various hydrohalide salts of 5-(4-pyridyl)tetrazole

Pellizzeri, S., Delaney, S. P., Korter, T. M. & Zubieta, J. A., 2013, In : Journal of Molecular Structure. 1050, p. 27-34 8 p.

Research output: Contribution to journal › Article

Terahertz spectroscopy

Density functional theory

Anions

Salts

Molecular vibrations

69 Citations (Scopus)

Using temperature-sensitive smart polymers to regulate DNA-mediated nanoassembly and encoded nanocarrier drug release

Hamner, K. L., Alexander, C. M., Coopersmith, K., Reishofer, D., Provenza, C. & Maye, M. M., Aug 27 2013, In : ACS Nano. 7, 8, p. 7011-7020 10 p.

Research output: Contribution to journal › Article

Polymers

drugs

Temperature

polymers

Pharmaceutical Preparations

7 Citations (Scopus)

Vibrational configuration interaction using a tiered multimode scheme and tests of approximate treatments of vibrational angular momentum coupling: A case study for methane

Mielke, S. L., Chakraborty, A. & Truhlar, D. G., Aug 15 2013, In : Journal of Physical Chemistry A. 117, 32, p. 7327-7343 17 p.

Research output: Contribution to journal › Article

Angular momentum

Methane

configuration interaction

methane

angular momentum

Woven Hydrogel Based Biosensor

Basner, A., Burton, E., Shetye, G., Simon, K., Weldon, M. & Luk, Y-Y., Aug 1 2013

Research output: Patent

Hydrogel

Biosensors

Sensors

Antigens

Antigen-Antibody Complex

6 Citations (Scopus)

Zero-point corrections for isotropic coupling constants for cyclohexadienyl radical, C6H7 and C6H6Mu: Beyond the bond length change approximation

Hudson, B. S. & Chafetz, S. K., May 2013, In : Molecules. 18, 5, p. 4906-4916 11 p.

Research output: Contribution to journal › Article

Bond length

Mesons

Geometry

Electron Spin Resonance Spectroscopy

Chemical shift

2012

7 Citations (Scopus)

Alkaline earth metal di- and triphenylmethanides: Analysis of ion association modes

Guino-O, M. A., Torvisco, A., Teng, W. & Ruhlandt, K., Jul 1 2012, In : Inorganica Chimica Acta. 389, p. 122-130 9 p.

Research output: Contribution to journal › Article

Alkaline Earth Metals

Alkaline earth metals

alkaline earth metals

Hempa

Metals

4 Citations (Scopus)

Analyzing near infrared scattering from human skin to monitor changes in hematocrit

Chaiken, J., Deng, B., Goodisman, J., Shaheen, G. & Bussjager, R. J., 2012, Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Vol. 8219. 821908

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

hematocrit

Hematocrit

erythrocytes

Skin

Blood

2 Citations (Scopus)

A self-assembled, metallo-organic supramolecular frequency doubler

Burke, L. A., Gonella, G., Heirtzler, F., Dai, H. L., Jones, S., Zubieta, J. A. & Roche, A. J., Jan 25 2012, In : Chemical Communications. 48, 7, p. 1000-1002 3 p.

Research output: Contribution to journal › Article

Program assemblers

Frequency doublers

Crystal symmetry

Self assembly

Frequency response

1 Citation (Scopus)

Asymmetric quantum dot growth via temperature cycling

Alam, R. & Maye, M. M., Jan 15 2012, In : Inorganica Chimica Acta. 380, 1, p. 114-117 4 p.

Research output: Contribution to journal › Article

Semiconductor quantum dots

quantum dots

cycles

Nucleation

rods

5 Citations (Scopus)

Bismuth(III) complexes derivatives of phosphinothiol ligands: The crystal structure of [Bi{2-(Ph 2P)C 6H 4S} 3]

Pérez-Lourido, P., Valencia, L., Romero, J., García-Vázquez, J. A., Sousa, A. & Zubieta, J. A., Sep 19 2012, In : Polyhedron. 45, 1, p. 200-203 4 p.

Research output: Contribution to journal › Article

Bismuth

bismuth

Crystal structure

Ligands

Derivatives

1 Citation (Scopus)

Bromine-sensitized solar photolysis of CO2

Braiman, M. S., Sailer-Kronlachner, W. & Varjas, C. J., Sep 6 2012, In : Journal of Physical Chemistry B. 116, 35, p. 10430-10436 7 p.

Research output: Contribution to journal › Article

Bromine

Photolysis

bromine

adsorbents

Adsorbents

20 Citations (Scopus)

Calculation of electron-hole recombination probability using explicitly correlated Hartree-Fock method

Elward, J. M., Thallinger, B. & Chakraborty, A., Mar 28 2012, In : The Journal of Chemical Physics. 136, 12, 124105.

Research output: Contribution to journal › Article

Electrons

Wave functions

electrons

approximation

configuration interaction

53 Citations (Scopus)

Designing quantum rods for optimized energy transfer with firefly luciferase enzymes

Alam, R., Fontaine, D. M., Branchini, B. R. & Maye, M. M., Jun 13 2012, In : Nano Letters. 12, 6, p. 3251-3256 6 p.

Research output: Contribution to journal › Article

fireflies

Bioluminescence

Firefly Luciferases

Energy transfer

enzymes

8 Citations (Scopus)

Emulsion of aqueous-based nonspherical droplets in aqueous solutions by single-chain surfactants: Templated assembly by nonamphiphilic lyotropic liquid crystals in Water

Varghese, N., Shetye, G. S., Bandyopadhyay, D., Gobalasingham, N., Seo, J., Wang, J. H., Theiler, B. & Luk, Y. Y., Jul 24 2012, In : Langmuir. 28, 29, p. 10797-10807 11 p.

Research output: Contribution to journal › Article

Liquid Crystals

Emulsions

Surface-Active Agents

Liquid crystals

emulsions

9 Citations (Scopus)

Enhanced detection of gold nanoparticles in agarose gel electrophoresis

Hasenoehrl, C., Alexander, C. M., Azzarelli, N. N. & Dabrowiak, J. C., Apr 2012, In : Electrophoresis. 33, 8, p. 1251-1254 4 p.

Research output: Contribution to journal › Article

Agar Gel Electrophoresis

Electrophoresis

Gold

Nanoparticles

Sepharose

Erratum: Calculation of the positron annihilation rate in PsH with the positronic extension of the explicitly correlated nuclear-electronic orbital method (Journal of Physical Chemistry A (2009) 113:16 (4004-4008) DOI: 10.1021/jp810410y)

Pak, M. V., Chakraborty, A. & Hammes-Schiffer, S., Nov 29 2012, In : Journal of Physical Chemistry A. 116, 47, p. 11781 1 p.

Research output: Contribution to journal › Article

Physical chemistry

Positron annihilation

physical chemistry

positron annihilation

orbitals

3 Citations (Scopus)

Erratum: Environment- and sequence-dependence of helical type in membrane-spanning peptides composed of β 3-amino acids (Organic Letters (3475))

Korendovych, I. V., Shandler, S. J., L. Montalvo, G. & Degrado, W. F., Jun 15 2012, In : Organic Letters. 14, 12, p. 3236 1 p.

Research output: Contribution to journal › Article

Membranes

Amino Acids

Peptides

10 Citations (Scopus)

Examining the effects of vitamin B12 conjugation on the biological activity of insulin: A molecular dynamic and in vivo oral uptake investigation

Clardy-James, S., Allis, D. G., Fairchild, T. J. & Doyle, R. P., Sep 2012, In : MedChemComm. 3, 9, p. 1054-1058 5 p.

Research output: Contribution to journal › Article

Molecular Dynamics Simulation

Vitamin B 12

Bioactivity

Molecular dynamics

Insulin

11 Citations (Scopus)

Expansion of protein farnesyltransferase specificity using "tunable" active site interactions: Development of bioengineered prenylation pathways

Hougland, J. L., Gangopadhyay, S. A. & Fierke, C. A., Nov 2 2012, In : Journal of Biological Chemistry. 287, 45, p. 38090-38100 11 p.

Research output: Contribution to journal › Article

Prenylation

Catalytic Domain

Peptides

Protein C

Substrates

10 Citations (Scopus)

Exploiting core-shell and core-alloy interfaces for asymmetric growth of nanoparticles

Njoki, P. N., Lutz, P., Wu, W., Solomon, L. & Maye, M. M., Oct 28 2012, In : Chemical Communications. 48, 84, p. 10449-10451 3 p.

Research output: Contribution to journal › Article

Nanoparticles

Phase behavior

Transmission electron microscopy

5 Citations (Scopus)

Expression and purification of human PYY(3-36) in Escherichia coli using a His-tagged small ubiquitin-like modifier fusion

Fazen, C. H., Kahkoska, A. R. & Doyle, R. P., Sep 2012, In : Protein Expression and Purification. 85, 1, p. 51-59 9 p.

Research output: Contribution to journal › Article

Ubiquitin

Peptide Hydrolases

Escherichia coli

Digestion

Factor Xa

10 Citations (Scopus)

Host -guest interactions involving platinum anticancer agents. DNA binding and cytotoxicity of a β-cyclodextrin-adamantane-Pt(IV) complex

Shi, Y. & Dabrowiak, J. C., Dec 1 2012, In : Inorganica Chimica Acta. 393, p. 337-339 3 p.

Research output: Contribution to journal › Article

Adamantane

Cyclodextrins

Cytotoxicity

Platinum

Antineoplastic Agents

3 Citations (Scopus)

Human airway epithelial cell responses to single walled carbon nanotube exposure: Nanorope-residual body formation

Panessa-Warren, B. J., Warren, J. B., Kisslinger, K., Crosson, K. & Maye, M. M., Nov 2012, In : Nanoscience and Nanotechnology Letters. 4, 11, p. 1110-1121 12 p.

Research output: Contribution to journal › Article

Single-walled carbon nanotubes (SWCN)

Peroxides

Epithelial Cells

Cell death

Cell membranes

11 Citations (Scopus)

Hydrothermal synthesis of a novel μ-dihydroxo-bis(2,6- pyridinedicarboxylatoaquachromium(III)) complex and investigation of its catalytic activity

Ay, B., Yildiz, E., Jones, S. & Zubieta, J. A., May 30 2012, In : Inorganica Chimica Acta. 387, p. 15-19 5 p.

Research output: Contribution to journal › Article

Chromium compounds

Thymol

Hydrothermal synthesis

Coordination Complexes

X ray analysis

15 Citations (Scopus)

Improved mode assignment for molecular crystals through anisotropic terahertz spectroscopy

Singh, R., George, D. K., Benedict, J. B., Korter, T. M. & Markelz, A. G., Oct 25 2012, In : Journal of Physical Chemistry A. 116, 42, p. 10359-10364 6 p.

Research output: Contribution to journal › Article

Terahertz spectroscopy

Molecular crystals

sucrose

Sucrose

Oxalic Acid

28 Citations (Scopus)

Investigating tautomeric polymorphism in crystalline anthranilic acid using terahertz spectroscopy and solid-state density functional theory

Delaney, S. P., Witko, E. M., Smith, T. M. & Korter, T. M., Aug 2 2012, In : Journal of Physical Chemistry A. 116, 30, p. 8051-8057 7 p.

Research output: Contribution to journal › Article

Terahertz spectroscopy

polymorphism

Polymorphism

Density functional theory

zwitterions

15 Citations (Scopus)

Investigation of electron-hole correlation using explicitly correlated configuration interaction method

Elward, J. M., Hoffman, J. & Chakraborty, A., May 11 2012, In : Chemical Physics Letters. 535, p. 182-186 5 p.

Research output: Contribution to journal › Article

Wave functions

configuration interaction

Electrons

quantum dots

expansion

34 Citations (Scopus)

Investigation of the drug binding properties and cytotoxicity of DNA-capped nanoparticles designed as delivery vehicles for the anticancer agents doxorubicin and actinomycin D

Alexander, C. M., Dabrowiak, J. C. & Maye, M. M., Oct 17 2012, In : Bioconjugate Chemistry. 23, 10, p. 2061-2070 10 p.

Research output: Contribution to journal › Article

Dactinomycin

Cytotoxicity

Antineoplastic Agents

Nanoparticles

Doxorubicin

42 Citations (Scopus)

Isolated Toll-like Receptor Transmembrane Domains Are Capable of Oligomerization

Godfroy, J. I., Roostan, M., Moroz, Y. S., Korendovych, I. & Yin, H., Nov 14 2012, In : PLoS One. 7, 11, e48875.

Research output: Contribution to journal › Article

Oligomerization

Toll-Like Receptors

dimerization

Dimerization

Membranes

8 Citations (Scopus)

Metal-citrate complex uptake and CitMHS transporters: From coordination chemistry to possible vaccine development

Huta, B., Lensboeur, J. J., Lowe, A. J., Zubieta, J. A. & Doyle, R. P., Dec 1 2012, In : Inorganica Chimica Acta. 393, p. 125-134 10 p.

Research output: Contribution to journal › Article

vaccines

transporter

Vaccines

citrates

Citric Acid

4 Citations (Scopus)

Metals in Medicine

Dabrowiak, J. C., Dec 1 2012, In : Inorganica Chimica Acta. 393, p. 1-2 2 p.

Research output: Contribution to journal › Article

medicine

Medicine

Metals

metals

18 Citations (Scopus)

Modified corrections for london forces in solid-state density functional theory calculations of structure and lattice dynamics of molecular crystals

King, M. D. & Korter, T. M., Jun 28 2012, In : Journal of Physical Chemistry A. 116, 25, p. 6927-6934 8 p.

Research output: Contribution to journal › Article

Molecular crystals

Lattice vibrations

Density functional theory

density functional theory

solid state